bowtie: ultrafast sequence aligner

Contents

  1. Overview of package
  2. Overview of package
    1. General usage
  3. Availability of package by cluster

Overview of package

General information about package
Package: bowtie
Description: ultrafast sequence aligner
For more information: https://sourceforge.net/projects/bowtie-bio
Categories:
License: Unknown

General usage information

Bowtie is an ultrafast and memory-efficient short read aligner for short DNA sequences (reads) from next-gen sequencers.

This module will add the bowtie and related commands to your PATH

You may wish to look at the bowtie2 package as well.

Available versions of the package bowtie, by cluster

This section lists the available versions of the package bowtieon the different clusters.

Available versions of bowtie on the Deepthought2 cluster (RHEL8)

Available versions of bowtie on the Deepthought2 cluster (RHEL8)
Version Module tags CPU(s) optimized for GPU ready?
1.2.3 bowtie/1.2.3 ivybridge Y