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AdapterRemoval: Tool for removing remnant adapter sequences from sequencing data

Contents

  1. Overview of package
    1. General usage
  2. Availability of package by cluster

Overview of package

General information about package
Package: AdapterRemoval
Description: Tool for removing remnant adapter sequences from sequencing data
For more information: https://adapterremoval.readthedocs.io
Categories:
License: OpenSource (GPL)

General usage information

AdapterRemoval searches for and removes adapter sequences from High-Throughput Sequencing (HTS) data and (optionally) trims low quality bases from the 3' end of reads following adapter removal. AdapterRemoval can analyze both single end and paired end data, and can be used to merge overlapping paired-ended reads into (longer) consensus sequences. Additionally, AdapterRemoval can construct a consensus adapter sequence for paired-ended reads, if which this information is not available.

This module will add the AdapterRemoval command to your PATH.

Available versions of the package AdapterRemoval, by cluster

This section lists the available versions of the package AdapterRemovalon the different clusters.

Available versions of AdapterRemoval on the Zaratab cluster

Available versions of AdapterRemoval on the Zaratab cluster
Version Module tags CPU(s) optimized for GPU ready?
2.3.1 adapterremoval/2.3.1 icelake, x86_64, zen2 Y






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